Flexible Cylinder Elliptical - flexible_cylinder_elliptical.c

    double form_volume(double length, double kuhn_length, double radius);
double Iq(double q, double length, double kuhn_length, double radius,
          double axis_ratio, double sld, double solvent_sld);
double flexible_cylinder_ex_kernel(double q, double length, double kuhn_length,
                                double radius, double axis_ratio, double sld,
                                double solvent_sld);
double elliptical_crosssection(double q, double a, double b);

double form_volume(double length, double kuhn_length, double radius)
{
    return 1.0;
}

double
elliptical_crosssection(double q, double a, double b)
{
    double sum=0.0;

    for(int i=0;i<GAUSS_N;i++) {
        const double zi = ( GAUSS_Z[i] + 1.0 )*M_PI_4;
        double sn, cn;
        SINCOS(zi, sn, cn);
        const double arg = q*sqrt(a*a*sn*sn + b*b*cn*cn);
        const double yyy = sas_2J1x_x(arg);
        sum += GAUSS_W[i] * yyy * yyy;
    }
    sum *= 0.5;
    return(sum);

}

double flexible_cylinder_ex_kernel(double q,
          double length,
          double kuhn_length,
          double radius,
          double axis_ratio,
          double sld,
          double solvent_sld)
{

    double flex,crossSect, cont;

    cont = sld - solvent_sld;
    crossSect = elliptical_crosssection(q,radius,(radius*axis_ratio));

    flex = Sk_WR(q,length,kuhn_length);
    flex *= crossSect;
    flex *= M_PI*radius*radius*axis_ratio*axis_ratio*length;
    flex *= cont*cont;
    flex *= 1.0e-4;

    return flex;
}

double Iq(double q,
          double length,
          double kuhn_length,
          double radius,
          double axis_ratio,
          double sld,
          double solvent_sld)
{

    double result = flexible_cylinder_ex_kernel(q,
                    length,
                    kuhn_length,
                    radius,
                    axis_ratio,
                    sld,
                    solvent_sld);

    return result;
}
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